Islet Gene Expression
- Gaulton Lab islet genomics http://www.gaultonlab.org/pages/Islet_expression_HPAP.html
- Single cell RNA-seq data in purified islets from 65 donors in HPAP http://www.tools.cmdga.org:3838/islet-hpap-browser/
- Sandberg lab single-cell gene expression atlas of human pancreatic islets in health and type 2 diabetes https://sandberglab.se/tool/pancreas
- Huising Lab Integrated Human scRNA-Seq Studies https://huisinglab.com/diabetes_2019/index.html
- Tabular Sapiens https://tabula-sapiens-portal.ds.czbiohub.org/
- Human Protein Atlas https://www.proteinatlas.org/
- Tabular Muris https://tabula-muris.ds.czbiohub.org/
Hydrogels
- Appel Lab, Calculator for solute diffusion in hydrogels http://www.supramolecularbiomaterials.com/msdm-calculator
- Appel Lab, Calculator for hydrogel extrudability http://www.supramolecularbiomaterials.com/extrudability
- Peppas and Peyton Labs, Hydrogel Design Tools https://hydrogeldesign.com/
Statistics
- G*power, tool to compute statistical power analyses https://www.psychologie.hhu.de/arbeitsgruppen/allgemeine-psychologie-und-arbeitspsychologie/gpower
- Appel Lab Power Calculation http://www.supramolecularbiomaterials.com/study-power
Imaging/Cytometry
- FPbase https://www.fpbase.org/
- FluoroFinder https://fluorofinder.com/
- OMIPs https://medicine.uiowa.edu/flowcytometry/resources/omips-optimized-panels
- Leica SP8 tutorial https://www.epfl.ch/research/facilities/ptbiop/equipment/leica-sp8-in1/
- ImageJ NeuroCyto Lab update site https://forum.image.sc/t/neurocyto-luts-update-site/26244
- ImageJ update sites how to https://imagej.net/update-sites/
- add the NeuroCyto Lab Update sites to your ImageJ for LUTs and great tools
- Stardist – segmentation for ImageJ https://imagej.net/plugins/stardist
- Cellpose – segmentation for ImageJ https://cellpose.readthedocs.io/en/latest/
- https://imagej.net/plugins/trackmate/detectors/trackmate-cellpose
Scientific Writing
- Broad Institute Journal Abstract https://mitcommlab.mit.edu/broad/commkit/journal-article-abstract/
- Southern Fried Science how to write a good abstract https://www.southernfriedscience.com/distracted-by-abstracts-tips-for-writing-a-good-abstract-for-a-scientific-conference/
- Nature, how to construct a Nature summary paragraph https://www.nature.com/documents/nature-summary-paragraph.pdf
- Bioicons https://bioicons.com/
Image/Data Forensics
- Forensically https://29a.ch/photo-forensics
- Plot Digitizers https://plotdigitizer.com/
- https://apps.automeris.io/wpd/
Video compression/conversion
- Compress your microscopy videos for PPT pres. with handbrake software https://handbrake.fr/